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q-bio.PE2025
Distinguishing Phylogenetic Level-2 Networks with Quartets and Inter-Taxon Quartet Distances
Niels Holtgrefe, Elizabeth S. Allman, Hector Baños +4
The inference of phylogenetic networks, which model complex evolutionary processes including hybridization and gene flow, remains a central challenge in evolutionary biology. Until…
q-bio.PE2018
Polynomial-Time Algorithms for Phylogenetic Inference Problems involving duplication and reticulation
Leo van Iersel, Remie Janssen, Mark Jones +2
A common problem in phylogenetics is to try to infer a species phylogeny from gene trees. We consider different variants of this problem. The first variant, called Unrestricted Min…