149 citations · 351 across the 13 of their papers we have counts for
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q-bio.BM2006★ 1 cited
Topological classification of RNA structures
Michael Bon, Graziano Vernizzi, Henri Orland +1
We present a novel topological classification of RNA secondary structures with pseudoknots. It is based on the topological genus of the circular diagram associated to the RNA base-…
q-bio.BM2005
The Topology of Pseudoknotted Homopolymers
G. Vernizzi, P. Ribeca, H. Orland +1
We consider the folding of a self-avoiding homopolymer on a lattice, with saturating hydrogen bond interactions. Our goal is to numerically evaluate the statistical distribution of…
q-bio.BM2004
Enumeration of RNA structures by Matrix Models
G. Vernizzi, H. Orland, A. Zee
We enumerate the number of RNA contact structures according to their genus, i.e. the topological character of their pseudoknots. By using a recently proposed matrix model formulati…