3 papers
q-bio.BM2025
CBTOPE2: An improved method for predicting of conformational B-cell epitopes in an antigen from its primary sequence
Anupma Pandey, Megha, Nishant Kumar +2
In 2009, our group pioneered a novel method CBTOPE for predicting conformational B-cell epitopes in a protein from its amino acid sequence, which received extensive citations from…
q-bio.BM2025
TumorHoPe2: An updated database for Tumor Homing Peptides
Diksha Kashyap, Devanshi Gupta, Naman Kumar Mehta +1
Addressing the growing need for organized data on tumor homing peptides (THPs), we present TumorHoPe2, a manually curated database offering extensive details on experimentally vali…
q-bio.BM2025
MAP Format for Representing Chemical Modifications, Annotations, and Mutations in Protein Sequences: An Extension of the FASTA Format
Akshay Shendre, Naman Kumar Mehta, Anand Singh Rathore +3
Several formats, including FASTA, PIR, GenBank, EMBL, and GCG, have been developed for representing protein sequences composed of natural amino acids. Among these, FASTA remains th…