36 citations · 36 across the 3 of their papers we have counts for
3 papers
cond-mat.soft2003
Design of a Protein Potential Energy Landscape by Parameter Optimization
Julian Lee, Seung-Yeon Kim, Jooyoung Lee
We propose an automated protocol for designing the energy landscape of a protein energy function by optimizing its parameters. The parameters are optimized so that not only the glo…
cond-mat.soft2003
Full Optimization of Linear Parameters of a United Residue Protein Potential
Julian Lee, Kibeom Park, Jooyoung Lee
We apply the general protocol of parameter optimization (Lee, J. et al. Phys. Chem. B 2001, 105, 7291) to the UNRES potential. In contrast to the earlier works where only the relat…
cond-mat.stat-mech2003★ 36 cited
Conformational space annealing and an off-lattice frustrated model protein
Seung-Yeon Kim, Sung Jong Lee, Jooyoung Lee
A global optimization method, conformational space annealing (CSA), is applied to study a 46-residue protein with the sequence B_9N_3(LB)_4N_3B_9N_3(LB)_5L, where B, L and N design…