most citedVertAX: a differentiable vertex model for learning epithelial tissue mechanics

1 citations · 1 across the 3 of their papers we have counts for

collaborators

9 papers

q-bio.PE2026

How genome redundancy can promote evolutionary innovation

Domenico Caudo, Mattia Miotto, Giancarlo Ruocco +1

Polyploidy is defined as the existence of more than two complete sets of homologous chromosomes. Despite it being a widespread phenomenon across the tree of life, its role as eithe…

cond-mat.soft2026

Non-equilibrium phase transitions in hybrid Voronoi models of cell colonies

Mattia Miotto, Giancarlo Ruocco, Matteo Paoluzzi

Eukaryotic cells are characterized by a stiff nucleus whose effect in modeling the collective behavior of cell aggregates is usually underestimated. However, increasing experimenta…

physics.bio-ph2026

Deciphering the chemical grammar of protein-RNA condensates

Greta Grassmann, Giancarlo Ruocco, Mattia Miotto

Biomolecular phase separation is typically attributed to the polymer physics of long, disordered chains. However, the underlying chemical grammar, i.e. the specific interactions be…

cs.LG20261 cited

VertAX: a differentiable vertex model for learning epithelial tissue mechanics

Alessandro Pasqui, Jim Martin Catacora Ocana, Anshuman Sinha +7

Epithelial tissues dynamically reshape through local mechanical interactions among cells, a process well captured by vertex models. Yet their many tunable parameters make inference…

q-bio.CB2025

Robust assessment of asymmetric division in colon cancer cells

Domenico Caudo, Chiara Giannattasio, Simone Scalise +6

Asymmetric partition of fate determinants during cell division is a hallmark of cell differentiation. Recent work suggested that such a mechanism is hijacked by cancer cells to inc…

q-bio.CB2025

A mother-machine microfluidic device for non-adherent mammalian cells reveals the population growth strategies

Simone Scalise, Giovanna Peruzzi, Davide Caprini +3

We develop a mother machine-like microfluidic device specifically designed to track the proliferation of T-cells via live-cell microscopy. Although numerous microfluidic setups hav…