activity
20172022
most citedNear Optimal Parallel Algorithms for Dynamic DFS in Undirected Graphs

5 citations · 6 across the 2 of their papers we have counts for

collaborators

10 papers

cs.DM2022

Cut paths and their remainder structure, with applications

Massimo Cairo, Shahbaz Khan, Romeo Rizzi +3

In a strongly connected graph , a cut arc (also called strong bridge) is an arc whose removal makes the graph no longer strongly connected. Equivalently, there…

cs.DS2022

Safety and Completeness in Flow Decompositions for RNA Assembly

Shahbaz Khan, Milla Kortelainen, Manuel Cáceres +2

Decomposing a network flow into weighted paths has numerous applications. Some applications require any decomposition that is optimal w.r.t. some property such as number of paths,…

cs.DS2021

Optimal Construction of Hierarchical Overlap Graphs

Shahbaz Khan

Genome assembly is a fundamental problem in Bioinformatics, where for a given set of overlapping substrings of a genome, the aim is to reconstruct the source genome. The classical…

cs.DM2020

The Hydrostructure: a Universal Framework for Safe and Complete Algorithms for Genome Assembly

Massimo Cairo, Shahbaz Khan, Romeo Rizzi +3

Genome assembly is a fundamental problem in Bioinformatics, requiring to reconstruct a source genome from an assembly graph built from a set of reads (short strings sequenced from…

cs.DS20201 cited

Computing all - bridges and articulation points simplified

Massimo Cairo, Shahbaz Khan, Romeo Rizzi +3

Given a directed graph and a pair of nodes and , an - bridge of is an edge whose removal breaks all - paths of . Similarly, an - articulation po…

cs.DS2020

Dynamic Matching Algorithms in Practice

Monika Henzinger, Shahbaz Khan, Richard Paul +1

In recent years, significant advances have been made in the design and analysis of fully dynamic maximal matching algorithms. However, these theoretical results have received very…