10 citations · 20 across the 6 of their papers we have counts for
6 papers
SiMPLISTIC: A Novel Pairwise Potential for Implicit Solvent Lipid Simulations with Single-site Models
Somajit Dey, Jayashree Saha
Implicit solvent, coarse-grained models with pairwise interactions can access the largest length and time scales in molecular dynamics simulations, owing to the absence of interact…
Minimal Modification to Nosé-Hoover Barostat Enables Correct NPT Sampling
Somajit Dey
The Nosé-Hoover dynamics for isothermal-isobaric (NPT) computer simulations do not generate the appropriate partition function for ergodic systems. The present paper points out tha…
Minimal Coarse-Grained Modelling Towards Implicit-Solvent Simulation of Generic Bolaamphiphiles
Somajit Dey, Jayashree Saha
A simple, dual-site model of bolaamphiphiles (bolaforms or bipolar amphiphiles) is developed based on an earlier single-site model of (monopolar) amphiphiles [S. Dey, J. Saha, Phys…
Time-Reversible, Symplectic, Angular Velocity Based Integrator for Rigid Linear Molecules
Somajit Dey
A very simple explicit integrator for the rotational motion of rigid linear molecules is presented which can preserve the rigidity of the molecules without requiring any constraint…
Time Isotropy, Lorentz Transformation and Inertial Frames
Somajit Dey
Homogeneity of space and time, spatial isotropy, principle of relativity and the existence of a finite speed limit (or its variants) are commonly believed to be the only axioms req…
Special Relativity (Lorentz Transformation) Follows from the Definition of Inertial Frames
Somajit Dey
Besides the defining space-time symmetries (homogeneity and isotropy) of inertial frames, the derivation of Lorentz transformation requires postulating the principle of relativity…