3 citations · 3 across the 2 of their papers we have counts for
4 papers
A RBA model for the chemostat modeling
Marc Dinh, Vincent Fromion
The purpose of this paper is to show that it is possible to replace Monod's type model of a chemostat by a constraint based model of bacteria at the genome scale. This new model is…
Automated generation of bacterial resource allocation models
Ana Bulović, Stephan Fischer, Marc Dinh +7
Resource Balance Analysis (RBA) is a computational method based on resource allocation, which performs accurate quantitative predictions of whole-cell states (i.e. growth rate, met…
RBA like problem with thermo-kinetics is non convex
M. Dinh, V. Fromion
The aim of this short note is to show that the class of problem involving kinetic or thermo-kinetic constraints in addition to the usual stoechiometric one is non convex.
Validation of the 3-under-2 principle of cell wall growth in Gram-positive bacteria by simulation of a simple coarse-grained model
M. Dinh, L. Strafella, P. Flores +3
The aim of this work is to propose a first coarse-grained model of Bacillus subtilis cell wall, handling explicitly the existence of multiple layers of peptidoglycans. In this firs…