69 citations · 70 across the 3 of their papers we have counts for
3 papers
q-bio.GN2022★ 1 cited
SeqMapPDB: A Standalone Pipeline to Identify Representative Structures of Protein Sequences and Mapping Residue Indices in Real-Time at Proteome Scale
Boshen Wang, Xue Lei, Wei Tian +3
Motivation: 3D structures of proteins provide rich information for understanding their biochemical roles. Identifying the representative protein structures for protein sequences is…
q-bio.BM2006★ 69 cited
Estimation of Amino Acid Residue Substitution Rates at Local Spatial Regions and Application in Protein Function Inference: A Bayesian Monte Carlo Approach
Yan Y. Tseng, Jie Liang
The amino acid sequences of proteins provide rich information for inferring distant phylogenetic relationships and for predicting protein functions. Estimating the rate matrix of r…
q-bio.BM2003
Are residues in a protein folding nucleus evolutionarily conserved?
Yan Yuan Tseng, Jie Liang
It is important to understand how protein folding and evolution influences each other. Several studies based on entropy calculation correlating experimental measurement of residue…