75 citations · 381 across the 17 of their papers we have counts for
18 papers
GORDA: Graph-based ORientation Distribution Analysis of SLI scatterometry Patterns of Nerve Fibres
Esteban Vaca, Miriam Menzel, Katrin Amunts +2
Scattered Light Imaging (SLI) is a novel approach for microscopically revealing the fibre architecture of unstained brain sections. The measurements are obtained by illuminating br…
Automated computation of nerve fibre inclinations from 3D polarised light imaging measurements of brain tissue
Miriam Menzel, Jan A. Reuter, David Gräßel +3
The method 3D polarised light imaging (3D-PLI) measures the birefringence of histological brain sections to determine the spatial course of nerve fibres (myelinated axons). While t…
Scatterometry Measurements with Scattered Light Imaging Enable New Insights into the Nerve Fiber Architecture of the Brain
Miriam Menzel, Marouan Ritzkowski, Jan André Reuter +3
The correct reconstruction of individual (crossing) nerve fibers is a prerequisite when constructing a detailed network model of the brain. The recently developed technique Scatter…
Contour Proposal Networks for Biomedical Instance Segmentation
Eric Upschulte, Stefan Harmeling, Katrin Amunts +1
We present a conceptually simple framework for object instance segmentation called Contour Proposal Network (CPN), which detects possibly overlapping objects in an image while simu…
Brain Modelling as a Service: The Virtual Brain on EBRAINS
Michael Schirner, Lia Domide, Dionysios Perdikis +41
The Virtual Brain (TVB) is now available as open-source cloud ecosystem on EBRAINS, a shared digital research platform for brain science. It offers services for constructing, simul…
2D histology meets 3D topology: Cytoarchitectonic brain mapping with Graph Neural Networks
Christian Schiffer, Stefan Harmeling, Katrin Amunts +1
Cytoarchitecture describes the spatial organization of neuronal cells in the brain, including their arrangement into layers and columns with respect to cell density, orientation, o…