9 citations · 10 across the 3 of their papers we have counts for
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q-bio.BM2019★ 1 cited
Can all-atom protein dynamics be reconstructed from the knowledge of C-alpha time evolution?
Jiaojiao Liu, Jin Dai, Jianfeng He +2
We inquire to what extent protein peptide plane and side chain dynamics can be reconstructed from knowledge of C-alpha dynamics. Due to lack of experimental data we analyze all ato…
q-bio.BM2017
Virtual reality analysis of intrinsic protein geometry with applications to cis peptide planes
Yanzhen Hou, Jin Dai, Nevena Ilieva +3
A protein is traditionally visualised as a piecewise linear discrete curve, and its geometry is conventionally characterised by the extrinsically determined Ramachandran angles. Ho…
q-bio.BM2016★ 9 cited
Towards multistage modelling of protein dynamics with monomeric Myc oncoprotein as an example
Jiaojiao Liu, Jin Dai, Jianfeng He +2
We propose to combine a mean field approach with all atom molecular dynamics into a multistage algorithm that can model protein folding and dynamics over very long time periods yet…