41 citations · 81 across the 21 of their papers we have counts for
3 papers · 1 filter
Latent-Kernel Discrete Flow Maps for Few-Step Generation
Mansoor Ahmed, Yue-Tsz Fan, Hemanth Venkateswara +1
Discrete diffusion and flow-matching models denoise a sequence over many steps, but to keep each step cheap, they factorize the transition across positions and decide every token i…
EpiFormer: Learning Antigen-Antibody Interactions for Epitope Prediction via Geometric Deep Learning
Mansoor Ahmed, Huirong Chai, Haoxin Wang +2
Antibodies neutralize foreign antigens by binding to specific surface regions called epitopes. Computational epitope prediction is critical for understanding immune recognition and…
CHIMERA-Bench: A Benchmark Dataset for Epitope-Specific Antibody Design
Mansoor Ahmed, Nadeem Taj, Imdad Ullah Khan +2
Computational antibody design has seen rapid methodological progress, with dozens of deep generative methods proposed in the past three years, yet the field lacks a standardized be…