activity
20122020
most citedSampling the isothermal-isobaric ensemble by Langevin dynamics

23 citations · 68 across the 8 of their papers we have counts for

collaborators

9 papers

physics.comp-ph2020

An adaptive planewave method for electronic structure calculations

Beilei Liu, Huajie Chen, Geneviève Dusson +2

We propose an adaptive planewave method for eigenvalue problems in electronic structure calculations. The method combines a priori convergence rates and accurate a posteriori error…

physics.chem-ph2017★ 5 cited

The optimal particle-mesh interpolation basis

Han Wang, Jun Fang, Xingyu Gao

The fast Ewald methods are widely used to compute the point-charge electrostatic interactions in molecular simulations. The key step that introduces errors in the computation is th…

cond-mat.mtrl-sci2017★ 2 cited

New zirconium hydrides predicted by structure search method based on first principles calculations

Xueyan Zhu, De-Ye Lin, Jun Fang +3

The formation of precipitated zirconium (Zr) hydrides is closely related to the hydrogen embrittlement problem for the cladding materials of pressured water reactors (PWR). In this…

physics.chem-ph2016★ 4 cited

Kaiser-Bessel Basis for the Particle-Mesh Interpolation

Xingyu Gao, Jun Fang, Han Wang

In this work, we introduce the Kaiser-Bessel interpolation basis for the particle-mesh interpolation in the fast Ewald method. A reliable a priori error estimate is developed to me…

physics.comp-ph2016

Multiple Staggered Mesh Ewald: Boosting the Accuracy of the Smooth Particle Mesh Ewald Method

Han Wang, Xingyu Gao, Jun Fang

The smooth particle mesh Ewald (SPME) method is the standard method for computing the electrostatic interactions in the molecular simulations. In this work, the multiple staggered…

physics.comp-ph2016★ 21 cited

On the existence of the optimal order for wavefunction extrapolation in Born-Oppenheimer molecular dynamics

Jun Fang, Xingyu Gao, Haifeng Song +1

Wavefunction extrapolation greatly reduces the number of self-consistent field (SCF) iterations and thus the overall computational cost of Born-Oppenheimer molecular dynamics (BOMD…

physics.comp-ph2016★ 13 cited

Parallel 3-dim fast Fourier transforms with load balancing of the plane waves

Xingyu Gao, Zeyao Mo, Jun Fang +1

The plane wave method is most widely used for solving the Kohn-Sham equations in first-principles materials science computations. In this procedure, the three-dimensional (3-dim) t…

cond-mat.stat-mech2016★ 23 cited

Sampling the isothermal-isobaric ensemble by Langevin dynamics

Xingyu Gao, Jun Fang, Han Wang

We present a new method of conducting molecular dynamics simulation in isothermal-isobaric ensemble based on Langevin equations of motion. The stochastic coupling to all particle a…

math.NA2012

A Symmetry-based Decomposition Approach to Eigenvalue Problems: Formulation, Discretization, and Implementation

Jun Fang, Xingyu Gao, Aihui Zhou

In this paper, we propose a decomposition approach for eigenvalue problems with spatial symmetries, including the formulation, discretization as well as implementation. This approa…