activity
20142024
most citedBigDataViewer: Interactive Visualization and Image Processing for Terabyte Data Sets

2 citations · 6 across the 4 of their papers we have counts for

collaborators

5 papers

cs.SE2024★ 1 cited

SciJava Ops: An Improved Algorithms Framework for Fiji and Beyond

Gabriel J. Selzer, Curtis T. Rueden, Mark C. Hiner +13

Many scientific software platforms provide plugin mechanisms that simplify the integration, deployment, and execution of externally developed functionality. One of the most widely…

cs.CV2020★ 1 cited

A Primal-Dual Solver for Large-Scale Tracking-by-Assignment

Stefan Haller, Mangal Prakash, Lisa Hutschenreiter +5

We propose a fast approximate solver for the combinatorial problem known as tracking-by-assignment, which we apply to cell tracking. The latter plays a key role in discovery in man…

cs.CV2017

The Candidate Multi-Cut for Cell Segmentation

Jan Funke, Chong Zhang, Tobias Pietzsch +1

Two successful approaches for the segmentation of biomedical images are (1) the selection of segment candidates from a merge-tree, and (2) the clustering of small superpixels by so…

q-bio.QM2015★ 2 cited

An automated workflow for parallel processing of large multiview SPIM recordings

Christopher Schmied, Peter Steinbach, Tobias Pietzsch +2

Multiview light sheet fluorescence microscopy (LSFM) allows to image developing organisms in 3D at unprecedented temporal resolution over long periods of time. The resulting massiv…

q-bio.QM2014★ 2 cited

BigDataViewer: Interactive Visualization and Image Processing for Terabyte Data Sets

Tobias Pietzsch, Stephan Saalfeld, Stephan Preibisch +1

The increasingly popular light sheet microscopy techniques generate very large 3D time-lapse recordings of living biological specimen. The necessity to make large volumetric datase…