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Breast Cancer Immunohistochemical Image Generation: a Benchmark Dataset and Challenge Review
Chuang Zhu, Shengjie Liu, Zekuan Yu +15
For invasive breast cancer, immunohistochemical (IHC) techniques are often used to detect the expression level of human epidermal growth factor receptor-2 (HER2) in breast tissue t…
Radiomic Deformation and Textural Heterogeneity (R-DepTH) Descriptor to characterize Tumor Field Effect: Application to Survival Prediction in Glioblastoma
Marwa Ismail, Prateek Prasanna, Kaustav Bera +10
The concept of tumor field effect implies that cancer is a systemic disease with its impact way beyond the visible tumor confines. For instance, in Glioblastoma (GBM), an aggressiv…
Quick Annotator: an open-source digital pathology based rapid image annotation tool
Runtian Miao, Robert Toth, Yu Zhou +2
Image based biomarker discovery typically requires an accurate segmentation of histologic structures (e.g., cell nuclei, tubules, epithelial regions) in digital pathology Whole Sli…
MRQy: An Open-Source Tool for Quality Control of MR Imaging Data
Amir Reza Sadri, Andrew Janowczyk, Ren Zou +6
We sought to develop a quantitative tool to quickly determine relative differences in MRI volumes both within and between large MR imaging cohorts (such as available in The Cancer…