activity
20172023
most citedSimulation and inference algorithms for stochastic biochemical reaction networks: from basic concepts to state-of-the-art

102 citations · 207 across the 7 of their papers we have counts for

collaborators
Showing 2021Show all

5 papers · 1 filter

q-bio.TO2021

Travelling wave analysis of cellular invasion into surrounding tissues

Maud El-Hachem, Scott W McCue, Matthew J Simpson

Single-species reaction-diffusion equations, such as the Fisher-KPP and Porous-Fisher equations, support travelling wave solutions that are often interpreted as simple mathematical…

math.AP2021

Travelling waves, blow-up and extinction in the Fisher-Stefan model

Scott W. McCue, Maud El-Hachem, Matthew J. Simpson

While there is a long history of employing moving boundary problems in physics, in particular via Stefan problems for heat conduction accompanied by a change of phase, more recentl…

physics.bio-ph2021

Mean exit time for diffusion on irregular domains

Matthew J Simpson, Daniel J Vandenheuvel, Joshua M Wilson +2

Many problems in physics, biology, and economics depend upon the duration of time required for a diffusing particle to cross a boundary. As such, calculations of the distribution o…

q-bio.QM2021

Bayesian uncertainty quantification for data-driven equation learning

Simon Martina-Perez, Matthew J. Simpson, Ruth E. Baker

Equation learning aims to infer differential equation models from data. While a number of studies have shown that differential equation models can be successfully identified when t…

q-bio.PE2021

Extinction of bistable populations is affected by the shape of their initial spatial distribution

Yifei Li, Stuart T. Johnston, Pascal R. Buenzli +2

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population sur…