103 citations · 199 across the 5 of their papers we have counts for
5 papers
Modeling community standards for metadata as templates makes data FAIR
Mark A. Musen, Martin J. O'Connor, Erik Schultes +3
It is challenging to determine whether datasets are findable, accessible, interoperable, and reusable (FAIR) because the FAIR Guiding Principles refer to highly idiosyncratic crite…
The CEDAR Workbench: An Ontology-Assisted Environment for Authoring Metadata that Describe Scientific Experiments
Rafael S. Gonçalves, Martin J. O'Connor, Marcos Martínez-Romero +4
The Center for Expanded Data Annotation and Retrieval (CEDAR) aims to revolutionize the way that metadata describing scientific experiments are authored. The software we have devel…
Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases
Marcos Martínez-Romero, Martin J. O'Connor, Attila L. Egyedi +4
Metadata-the machine-readable descriptions of the data-are increasingly seen as crucial for describing the vast array of biomedical datasets that are currently being deposited in p…
Metadata in the BioSample Online Repository are Impaired by Numerous Anomalies
Rafael S. Gonçalves, Martin J. O'Connor, Marcos Martínez-Romero +2
The metadata about scientific experiments are crucial for finding, reproducing, and reusing the data that the metadata describe. We present a study of the quality of the metadata s…
NCBO Ontology Recommender 2.0: An Enhanced Approach for Biomedical Ontology Recommendation
Marcos Martinez-Romero, Clement Jonquet, Martin J. O'Connor +3
Biomedical researchers use ontologies to annotate their data with ontology terms, enabling better data integration and interoperability. However, the number, variety and complexity…