5 citations · 10 across the 2 of their papers we have counts for
3 papers
physics.bio-ph2020
Modeling supercoiled DNA interacting with an anchored cluster of proteins: towards a quantitative estimation of chromosomal DNA supercoiling
Jean-Charles Walter, Thibaut Lepage, Jérôme Dorignac +5
We investigate the measurement of DNA supercoiling density () along chromosomes using interaction frequencies between DNA and DNA-anchored clusters of proteins. Specifically, we…
physics.bio-ph2019★ 5 cited
A polymer model of bacterial supercoiled DNA including structural transitions of the double helix
Thibaut Lepage, Ivan Junier
DNA supercoiling, the under or overwinding of DNA, is a key physical mechanism both participating to compaction of bacterial genomes and making genomic sequences adopt various stru…
physics.bio-ph2017★ 5 cited
Modeling Bacterial DNA: Simulation of Self-avoiding Supercoiled Worm-Like Chains Including Structural Transitions of the Helix
Thibaut Lepage, Ivan Junier
Under supercoiling constraints, naked DNA, such as a large part of bacterial DNA, folds into braided structures called plectonemes. The double-helix can also undergo local structur…