38 citations · 46 across the 3 of their papers we have counts for
5 papers
Stroke recovery phenotyping through network trajectory approaches and graph neural networks
Sanjukta Krishnagopal, Keith Lohse, Robynne Braun
Stroke is a leading cause of neurological injury characterized by impairments in multiple neurological domains including cognition, language, sensory and motor functions. Clinical…
Time-lagged Ordered Lasso for network inference
Phan Nguyen, Rosemary Braun
Accurate gene regulatory networks can be used to explain the emergence of different phenotypes, disease mechanisms, and other biological functions. Many methods have been proposed…
Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors
Gary Wilk, Rosemary Braun
Genome-wide association studies (GWAS) have identified single nucleotide polymorphisms (SNPs) associated with trait diversity and disease susceptibility, yet the functional propert…
Integrative analysis reveals disrupted pathways regulated by microRNAs in cancer
Gary Wilk, Rosemary Braun
MicroRNAs (miRNAs) are small endogenous regulatory molecules that modulate gene expression post-transcriptionally. Although differential expression of miRNAs have been implicated i…
Semi-supervised network inference using simulated gene expression dynamics
Phan Nguyen, Rosemary Braun
Motivation: Inferring the structure of gene regulatory networks from high--throughput datasets remains an important and unsolved problem. Current methods are hampered by problems s…