62 citations · 139 across the 6 of their papers we have counts for
6 papers
From Effective Interactions Extracted Using Hi-C Data to Chromosome Structures in Conventional and Inverted Nuclei
Sucheol Shin, Guang Shi, D. Thirumalai
Contact probabilities between loci, separated by arbitrary genomic distance, for a number of cell types have been reported using genome-wide chromosome conformation capture (Hi-C)…
Transcription-induced active forces suppress chromatin motion
Sucheol Shin, Guang Shi, Hyun Woo Cho +1
The organization of interphase chromosomes in a number of species is starting to emerge thanks to advances in a variety of experimental techniques. However, much less is known abou…
Water Dynamics Around Proteins: T- and R-States of Hemoglobin and Melittin
Marco Pezzella, Krystel El Hage, Michiel J. M. Niesen +4
The water dynamics, as characterized by the local hydrophobicity (LH), is investigated for tetrameric hemoglobin and dimeric melittin. For the T0 to R0 transition in Hb it is found…
Water's interfacial hydrogen bonding structure reveals the effective strength of surface-water interactions
Sucheol Shin, Adam P. Willard
The interactions of a hydrophilic surface with water can significantly influence the characteristics of the liquid water interface. In this manuscript, we explore this influence by…
Three-body Hydrogen Bond Defects Contribute Significantly to the Dielectric Properties of the Liquid Water-Vapor Interface
Sucheol Shin, Adam P. Willard
In this Letter, we present a simple model of aqueous interfacial molecular structure and we use this model to isolate the effects of hydrogen bonding on the dielectric properties o…
Characterizing Hydration Properties Based on the Orientational Structure of Interfacial Water Molecules
Sucheol Shin, Adam P. Willard
In this manuscript, we present a general computational method for characterizing the molecular structure of liquid water interfaces as sampled from atomistic simulations. With this…