Punctuated equilibria and 1/f noise in a biological coevolution model with individual-based dynamics
arXiv:nlin/0306023 · doi:10.1103/PhysRevE.68.031913
Abstract
We present a study by linear stability analysis and large-scale Monte Carlo simulations of a simple model of biological coevolution. Selection is provided through a reproduction probability that contains quenched, random interspecies interactions, while genetic variation is provided through a low mutation rate. Both selection and mutation act on individual organisms. Consistent with some current theories of macroevolutionary dynamics, the model displays intermittent, statistically self-similar behavior with punctuated equilibria. The probability density for the lifetimes of ecological communities is well approximated by a power law with exponent near -2, and the corresponding power spectral densities show 1/f noise (flicker noise) over several decades. The long-lived communities (quasi-steady states) consist of a relatively small number of mutualistically interacting species, and they are surrounded by a ``protection zone'' of closely related genotypes that have a very low probability of invading the resident community. The extent of the protection zone affects the stability of the community in a way analogous to the height of the free-energy barrier surrounding a metastable state in a physical system. Measures of biological diversity are on average stationary with no discernible trends, even over our very long simulation runs of approximately 3.4x10^7 generations.
20 pages RevTex. Minor revisions consistent with published version
References in corpus (10)
- Biological Evolution and Statistical Physics
- A Bit-String Model for Biological Aging
- Metastable lifetimes in a kinetic Ising model: Dependence on field and system size
- The Tangled Nature model as an evolving quasi-species model
- Power of the power-laws: lessons from unification of small and large time scales for evolution
- Soft versus Hard Dynamics for Field-driven Solid-on-Solid Interfaces
- 1/f-noise in the Bak-Sneppen model
- Strategies for the evolution of sex
- Comment on "1/f noise in the Bak-Sneppen model"
- Fluctuations and correlations in population models with age structure
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