SO(3)-RoPE for Spherical Transformers

Abstract

Spherical data arise in many scientific applications. Often spherical transformers disregard the geometry of the underlying spherical domain, causing distortions and coordinate singularities near the poles. We introduce SO(3)-RoPE, a relative positional embedding that incorporates spherical geometry into transformer attention through unitary SO(3) representations. Our formulation is SO(3)-equivariant and compatible with FlashAttention, retaining efficiency of vanilla transformers. On shallow water dynamics prediction over a rotating sphere, our SO3ViT outperforms an S2Transformer baseline with lower errors and reduced runtime.

arXiv commentAccepted at the Neurips Workshop 2026: Representations for the Physical Sciences