Role of activity and dissipation in achieving precise beating in cilia: Insights from the rower model
arXiv:2504.07681 · doi:10.1088/1367-2630/ae437a
Abstract
Cilia and flagella are micron-sized filaments that actively beat with remarkable precision in a viscous medium, driving microorganism movement and efficient flow. We study the rower model to uncover how cilia activity and dissipation enable this precise motion. In this model, cilia motion is represented by a micro-bead's Brownian movement between two distant harmonic potentials. At specific locations, energy pumps trigger potential switches, capturing cilia activity and generating oscillations. We quantify precision of oscillation using a quality factor, identifying its scaling with activity and oscillation amplitude, finding precision maximization at an optimal amplitude. The data collapse is not accurate for noisy oscillations. An exact analytic expression for the precision quality factor, based on first passage time fluctuations, and derived in the small noise approximation, explains its optimality and scaling. Energy budget analysis shows the quality factor's consistency with the thermodynamic uncertainty relation. Finally, we demonstrate that asymmetric beating reduces oscillation precision compared to the symmetric model: although the optimal amplitude remains unchanged, the overall scaling of the quality factor depends explicitly on the asymmetry parameter.
arXiv comment10 pages, 5 figures
References in corpus (33)
- Thermodynamic uncertainty relation for biomolecular processes
- Hydrodynamic flow patterns and synchronization of beating cilia
- Spontaneous creation of macroscopic flow and metachronal waves in an array of cilia
- Finding the ciliary beating pattern with optimal efficiency
- Finite-time generalization of the thermodynamic uncertainty relation
- The free energy cost of accurate biochemical oscillations
- Synchronization and Collective Dynamics in a Carpet of Microfluidic Rotors
- A basic swimmer at low Reynolds number
- Generic Conditions for Hydrodynamic Synchronization
- Cost and Precision of Brownian Clocks
- Active phase and amplitude fluctuations of flagellar beating
- Thermodynamics of statistical inference by cells
- First passage of a particle in a potential under stochastic resetting: a vanishing transition of optimal resetting rate
- Mixing and transport by ciliary carpets: a numerical study
- Metachronal wave and hydrodynamic interaction for deterministic switching rowers
- Realizing the physics of motile cilia synchronization with driven colloids
- Rhythmicity, Recurrence, and Recovery of Flagellar Beating
- Stochastic timing in gene expression for simple regulatory strategies
- A multiscale biophysical model gives quantized metachronal waves in a lattice of cilia
- First Exit Times of Harmonically Trapped Particles: A Didactic Review
- Coherence of Biochemical Oscillations is Bounded by Driving Force and Network Topology
- Nonlinear amplitude dynamics in flagellar beating
- Synchronization in A Carpet of Hydrodynamically Coupled Rotors with Random Intrinsic Frequency
- Beat regulation in twisted axonemes
- Moments of the first passage time under external driving
- Flagella-like beating of a single microtubule
- Nonreciprocal interactions give rise to fast cilium synchronisation in finite systems
- Hydrodynamic interactions of cilia on a spherical body
- Patterns of synchronization in the hydrodynamic coupling of active colloids
- Energetics of synchronization in coupled oscillators rotating on circular trajectories
- Energetics of synchronisation for model flagella and cilia
- A Minimal Model of the Hydrodynamical Coupling of Flagella on a Spherical Body with application to Volvox
- Role of spatial heterogeneity on the collective dynamics of cilia beating in a minimal 1D model