Halfspace Representations of Path Polytopes of Trees

Abstract

Given a tree $T$, its path polytope is the convex hull of the edge indicator vectors for the paths between any two distinct leaves in $T$. These polytopes arise naturally in polyhedral geometry and applications, such as phylogenetics, tropical geometry, and algebraic statistics. We provide a minimal halfspace representation of these polytopes. The construction is made inductively using toric fiber products.

12 pages, 3 figures