Non-perturbative exciton transfer rate analysis of the Fenna-Matthews-Olson photosynthetic complex under reduced and oxidised conditions
arXiv:2412.14883 · doi:10.1063/5.0251613
Abstract
Two-dimensional optical spectroscopy experiments have shown that exciton transfer pathways in the Fenna-Matthews-Olson (FMO) photosynthetic complex differ drastically under reduced and oxidised conditions, suggesting a functional role for collective vibronic mechanisms that may be active in the reduced form but attenuated in the oxidised state. Higgins et al. [PNAS 118 (11) e2018240118 (2021)] used Redfield theory to link the experimental observations to altered exciton transfer rates due to oxidative onsite energy shifts that detune excitonic energy gaps from a specific vibrational frequency of the bacteriochlorophyll (BChl) a. Using a memory kernel formulation of the hierarchical equations of motion, we present non-perturbative estimations of transfer rates that yield a modified physical picture. Our findings indicate that onsite energy shifts alone cannot reproduce the observed rate changes in oxidative environments, either qualitatively or quantitatively. By systematically examining combined changes both in site energies and the local environment for the oxidised complex, while maintaining consistency with absorption spectra, our results suggest that vibronic tuning of transfer rates may indeed be active in the reduced complex. However, we achieve qualitative, but not quantitative, agreement with the experimentally measured rates. Our analysis indicates potential limitations of the FMO electronic Hamiltonian, which was originally derived by fitting spectra to second-order cumulant and Redfield theories. This suggests that reassessment of these electronic parameters with a non-perturbative scheme, or derived from first principles, is essential for a consistent and accurate understanding of exciton dynamics in FMO under varying redox conditions.
arXiv comment14 pages, 7 figures
References in corpus (22)
- SciPy 1.0--Fundamental Algorithms for Scientific Computing in Python
- QuTiP 2: A Python framework for the dynamics of open quantum systems
- Long-lived quantum coherence in photosynthetic complexes at physiological temperature
- Perspective: Numerically "exact" approach to open quantum dynamics: The hierarchical equations of motion (HEOM)
- Origin of Long Lived Coherences in Light-Harvesting Complexes
- Efficient non-Markovian quantum dynamics using time-evolving matrix product operators
- Non-Markovian quantum processes: complete framework and efficient characterisation
- Nature does not rely on long-lived electronic quantum coherence for photosynthetic energy transfer
- Non-classicality of the molecular vibrations assisting exciton energy transfer at room temperature
- The fundamental role of quantized vibrations in coherent light harvesting by cryptophyte algae
- Modelling of Oscillations in Two-Dimensional Echo-Spectra of the Fenna-Matthews-Olson Complex
- Local protein solvation drives direct down-conversion in phycobiliprotein PC645 via incoherent vibronic transport
- QuTiP-BoFiN: A bosonic and fermionic numerical hierarchical-equations-of-motion library with applications in light-harvesting, quantum control, and single-molecule electronics
- An efficient method to calculate excitation energy transfer in light harvesting systems. Application to the FMO complex
- Exact Simulation of Pigment-Protein Complexes Unveils Vibronic Renormalization of Electronic Parameters in Ultrafast Spectroscopy
- Tensor network simulation of chains of non-Markovian open quantum systems
- Sublinear scaling in non-Markovian open quantum systems simulations
- Excitation energy transfer efficiency: equivalence of transient and stationary setting and the absence of non-Markovian effects
- On the theory of excitonic delocalization for robust vibronic dynamics in LH2
- Higher-order corrections to the Redfield equation with respect to the system-bath coupling based on the hierarchical equations of motion
- Excitation energy transfer rates: comparison of approximate methods to the exact solution
- A new angle on the well-known FMO photosynthetic complex