paper

On the system size dependence of the diffusion coefficients in MD simulations: A simple correction formula for pure dense fluids

arXiv:2402.09348 · doi:10.1021/acs.jpcb.3c07184

Abstract

A practical correction formula relating the self-diffusion coefficient of dense liquids from molecular dynamics simulations with periodic boundary conditions to the self-diffusion coefficient in the thermodynamic limit is discussed. This formula applies to pure dense fluids and has a very simple form , where is the self-diffusion coefficient in the thermodynamic limit and is the number of particles in the simulation. The numerical factor depends on the geometry of the simulation cell. Remarkably, for the most popular cubic geometry. The success of this formula is supported by results from MD simulations, including very recent simulations with a ``magic'' simulation geometry.

4 pages, 4 figures

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