paper

How Does Mg Interact with ATP? Biomolecular Structure through the Lens of Liquid-Jet Photoelectron Spectroscopy

arXiv:2306.05352 · doi:10.1021/jacs.4c03174

Abstract

Site-specific information on how adenosine triphosphate in the aqueous phase (ATP) interacts with magnesium (Mg) is a prerequisite to understanding its complex biochemistry. To gather such information, we apply liquid-jet photoelectron spectroscopy (LJ-PES) assisted by electronic-structure calculations to study ATP solutions with and without dissolved Mg. Valence photoemission data reveal spectral changes in the phosphate and adenine features of ATP due to interactions with the divalent cation. Chemical shifts in Mg 2p, Mg 2s, P 2p, and P 2s core-level spectra as a function of the Mg/ATP concentration ratio are correlated to the formation of [MgATP] and MgATP complexes, demonstrating the element-sensitivity of the technique to Mg-phosphate interactions. In addition, we report and compare P 2s data from ATP and adenosine mono- and di-phosphate (AMP and ADP, respectively) solutions, probing the electronic structure of the phosphate chain and the local environment of individual phosphate units in ATP. Finally, we have recorded intermolecular Coulombic decay (ICD) spectra initiated by ionization of Mg 1s electrons to probe ligand exchange in the Mg-ATP coordination environment, demonstrating the unique capabilities of ICD for revealing structural information. Our results provide an overview of the electronic structure of ATP and Mg-ATP moieties relevant to phosphorylation and dephosphorylation reactions that are central to bioenergetics in living organisms.

Main manuscript: 16 pages, 8 figures. Supporting information: 31 pages, 7 figures

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