Assessing the structural heterogeneity of supercooled liquids through community inference
arXiv:2002.02726 · doi:10.1063/5.0004732
Abstract
We present an information-theoretic approach inspired by distributional clustering to assess the structural heterogeneity of particulate systems. Our method identifies communities of particles that share a similar local structure by harvesting the information hidden in the spatial variation of two- or three-body static correlations. This corresponds to an unsupervised machine learning approach that infers communities solely from the particle positions and their species. We apply this method to three models of supercooled liquids and find that it detects subtle forms of local order, as demonstrated by a comparison with the statistics of Voronoi cells. Finally, we analyze the time-dependent correlation between structural communities and particle mobility and show that our method captures relevant information about glassy dynamics.
arXiv comment20 pages, 10 figures. Data relevant to this work are available at https://doi.org/10.5281/zenodo.3653942
References in corpus (30)
- Theoretical perspective on the glass transition and amorphous materials
- Scaling behavior in the -relaxation regime of a supercooled Lennard-Jones mixture
- Random Packings of Frictionless Particles
- Irreversible reorganization in a supercooled liquid originates from localised soft modes
- The role of local structure in dynamical arrest
- Identifying structural flow defects in disordered solids using machine learning methods
- Predicting the long time dynamic heterogeneity in a supercooled liquid on the basis of short time heterogeneities
- Roles of icosahedral and crystal-like order in hard spheres glass transition
- Multiresolution community detection for megascale networks by information-based replica correlations
- Non-monotonic temperature evolution of dynamic correlations in glass-forming liquids
- Understanding fragility in supercooled Lennard-Jones mixtures. I. Locally preferred structures
- Local resolution-limit-free Potts model for community detection
- Identification of structure in condensed matter with the topological cluster classification
- Entropy based fingerprint for local crystalline order
- Extraction of Force-Chain Network Architecture in Granular Materials Using Community Detection
- Identification of long-lived clusters and their link to slow dynamics in a model glass former
- Correlation of Local Order with Particle Mobility in Supercooled Liquids is Highly System Dependent
- Unsupervised learning for local structure detection in colloidal systems
- Locally preferred structures and many-body static correlations in viscous liquids
- Information-theoretic measurements of coupling between structure and dynamics in glass-formers
- Multiple length and time scales of dynamic heterogeneities in model glass-forming liquids: A systematic analysis of multi-point and multi-time correlations
- Lifetimes and Lengthscales of Structural Motifs in a Model Glassformer
- Complex Crystals from Size-disperse Spheres
- Importance of many-body correlations in glass transition: an example from polydisperse hard spheres
- Assessing the Utility of Structure in Amorphous Materials
- Using mutual information to measure order in model glass-formers
- From Close-Packed to Topologically Close-Packed: Formation of Laves Phases in Moderately Polydisperse Hard-Sphere Mixtures
- Local order and crystallization of dense polydisperse hard spheres
- Structure of inactive states of a binary Lennard-Jones mixture
- Local multiresolution order in community detection
Cited by in corpus (36)
- Predicting plasticity in disordered solids from structural indicators
- Autonomously revealing hidden local structures in supercooled liquids
- Modern computational studies of the glass transition
- Averaging local structure to predict the dynamic propensity in supercooled liquids
- Predicting dynamic heterogeneity in glass-forming liquids by physics-inspired machine learning
- Relevance of Shear Transformations in the Relaxation of Supercooled Liquids
- Comparing machine learning techniques for predicting glassy dynamics
- Roadmap on machine learning glassy dynamics
- Soft Metamaterials: Adaptation and Intelligence
- Dimensionality reduction of local structure in glassy binary mixtures
- Finding defects in glasses through machine learning
- Perspective: How to overcome dynamical density functional theory
- Improving the prediction of glassy dynamics by pinpointing the local cage
- Scaling Description of Dynamical Heterogeneity and Avalanches of Relaxation in Glass-Forming Liquids
- Johari-Goldstein relaxation in glassy dynamics originates from two-scale energy landscape
- Many-body correlations are non-negligible in both fragile and strong glassformers
- Dynamic heterogeneity at the experimental glass transition predicted by transferable machine learning
- Correlation of plastic events with local structure in jammed packings across spatial dimensions
- Multi-component generalized mode-coupling theory: Predicting dynamics from structure in glassy mixtures
- Geometry-enhanced graph neural network for learning the smoothness of glassy dynamics from static structure
- Rotation-equivariant Graph Neural Networks for Learning Glassy Liquids Representations
- Exploring glassy dynamics with Markov state models from graph dynamical neural networks
- Dynamic heterogeneity in polydisperse systems: A comparative study of the role of local structural order parameter and particle size
- Normalizing flows as an enhanced sampling method for atomistic supercooled liquids
- Spatial structure of unstable normal modes in a glass-forming liquid
- Machine learning glass caging order parameters with an artificial nested neural network
- Dead or alive: Distinguishing active from passive particles using supervised learning
- A deep learning approach to the measurement of long-lived memory kernels from Generalised Langevin Dynamics
- Graph neural network-based structural classification of glass-forming liquids and its interpretation via self-attention mechanism
- In search of a precursor for crystal nucleation of hard and charged colloids
- Correlation between plastic rearrangements and local structure in a cyclically driven glass
- Revisiting the single-saddle model for the -relaxation of supercooled liquids
- partycls: A Python package for structural clustering
- Shape matters: Inferring the motility of confluent cells from static images
- Unsupervised topological learning for identification of atomic structures
- Static self-induced heterogeneity in glass-forming liquids: Overlap as a microscope