Local loop opening in untangled ring polymer melts: A detailed "Feynman test" of models for the large scale structure
arXiv:1902.05136 · doi:10.1039/C8SM02587H
Abstract
The conformational statistics of ring polymers in melts or dense solutions is strongly affected by their quenched microscopic topological state. The effect is particularly strong for untangled (i.e. non-concatenated and unknotted) rings, which are known to crumple and segregate. Here we study these systems using a computationally efficient multi-scale approach, where we combine massive simulations on the fiber level with the explicit construction of untangled ring melt configurations based on theoretical ideas for their large scale structure. We find (i) that topological constraints may be neglected on scales below the standard entanglement length, , (ii) that rings with a size exhibit nearly ideal lattice tree behavior characterized by primitive paths which are randomly branched on the entanglement scale, and (iii) that larger rings are compact with gyration radii . The detailed comparison between equilibrated and constructed ensembles allows us to perform a `Feynman test' of our understanding of untangled rings: can we convert ideas for the large-scale ring structure into algorithms for constructing (nearly) equilibrated ring melt samples? We show that most structural observables are quantitatively reproduced by two different construction schemes: hierarchical crumpling and ring melts derived from the analogy to interacting branched polymers. However, the latter fail the `Feynman test' with respect to the magnetic radius, , which we have defined based on an analogy to magnetostatics. While is expected to vanish for double-folded structures, the observed values of provide a simple and computationally convenient measure of the presence of a non-negligible amount of local loop opening in crumpled rings.
arXiv commentThe article features 19 pages, with 14 figures. This is the unrefereed version of the article. The final version will appear soon in Soft Matter
References in corpus (25)
- Equilibration of Long Chain Polymer Melts in Computer Simulations
- Molecular Dynamics Simulation Study of Nonconcatenated Ring Polymers in a Melt: I. Statics
- From a melt of rings to chromosome territories: The role of topological constraints in genome folding
- Molecular Dynamics Simulation Study of Nonconcatenated Ring Polymers in a Melt: II. Dynamics
- Rheology of Ring Polymer Melts: From Linear Contaminants to Ring/Linear Blends
- Topological effects in ring polymers: A computer simulation study
- Ring polymers in the melt state: the physics of crumpling
- Probing the entanglement and locating knots in ring polymers: a comparative study of different arc closure schemes
- Annealed lattice animal model and Flory theory for the melt of non-concatenated rings: Towards the physics of crumpling
- A Topologically Driven Glass in Ring Polymers
- Topological effects in ring polymers (II): Influence of persistence length
- Ring polymers in melts and solutions: scaling and crossover
- Anomalous diffusion in fractal globules
- Topological versus rheological entanglement length in primitive path analysis protocols
- Viscoelasticity and primitive path analysis of entangled polymer liquids: From f-actin to polyethylene
- Equilibration of High Molecular-Weight Polymer Melts: A Hierarchical Strategy
- Glassiness and Heterogeneous Dynamics in Dense Solutions of Ring Polymers
- Collapse Dynamics of a Homopolymer: Theory and Simulation
- Colocalization of coregulated genes: a steered molecular dynamics study of human chromosome 19
- Ring conformations in bidisperse blends of ring polymers
- Multiscale approach to equilibrating model polymer melts
- Computer simulations of melts of randomly branching polymers
- Conformational statistics of randomly-branching double-folded ring polymers
- Beyond Flory theory: Distribution functions for interacting lattice trees
- Computer simulations of randomly branching polymers: Annealed vs. quenched branching structures
Cited by in corpus (14)
- Topological Linking Drives Anomalous Thickening of Ring Polymers In Weak Extensional Flows
- Ring-o-rings: a new category of supramolecular structures with topologically tunable properties
- Entanglement length scale separates threading from branching of unknotted and non-concatenated ring polymers in melts
- Computer simulations of melts of ring polymers with non-conserved topology: A dynamic Monte Carlo lattice model
- Multiscale equilibration of highly entangled isotropic model polymer melts
- Merging 1D and 3D genomic information: Challenges in modelling and validation
- Amoeba Monte Carlo algorithms for random trees with controlled branching activity: efficient trial move generation and universal dynamics
- Entropy of self-avoiding branching polymers: mean field theory and Monte Carlo simulations
- The configurational entropy of random trees
- Entropic organization of topologically modified ring polymers in spherical confinement
- Ring polymers in two-dimensional melts double-fold around randomly branching "primitive shapes"
- Configurational entropy of randomly double-folding ring polymers
- Coherent modeling of double-folded ring polymers and their underlying random tree structure
- Entropic alignment of topologically modified ring polymers in cylindrical confinement