A latent factor approach for prediction from multiple assays

Abstract

In many domains such as healthcare or finance, data often come in different assays or measurement modalities, with features in each assay having a common theme. Simply concatenating these assays together and performing prediction can be effective but ignores this structure. In this setting, we propose a model which contains latent factors specific to each assay, as well as a common latent factor across assays. We frame our model-fitting procedure, which we call the "Sparse Factor Method" (SFM), as an optimization problem and present an iterative algorithm to solve it.