Some Reduction Operations to Pairwise Compatibility Graphs

Abstract

A graph $G=(V,E)$ with a vertex set $V$ and an edge set $E$ is called a pairwise compatibility graph (PCG, for short) if there are a tree $T$ whose leaf set is $V$, a non-negative edge weight $w$ in $T$, and two non-negative reals $d_{\min }\le d_{\max }$ such that $G$ has an edge $uv\in E$ if and only if the distance between $u$ and $v$ in the weighted tree $(T,w)$ is in the interval $[d_{\min },d_{\max }]$. PCG is a new graph class motivated from bioinformatics. In this paper, we give some necessary and sufficient conditions for PCG based on cut-vertices and twins, which provide reductions among PCGs. Our results imply that complete $k$-partite graph, cactus, and some other graph classes are subsets of PCG.

arXiv comment9 pages and 3 figures