Computing the Absolute Gibbs Free Energy in Atomistic Simulations: Applications to Defects in Solids
arXiv:1710.02815 · doi:10.1103/PhysRevB.97.054102
Abstract
The Gibbs free energy is the fundamental thermodynamic potential underlying the relative stability of different states of matter under constant-pressure conditions. However, computing this quantity from atomic-scale simulations is far from trivial. As a consequence, all too often the potential energy of the system is used as a proxy, overlooking entropic and anharmonic effects. Here we discuss a combination of different thermodynamic integration routes to obtain the absolute Gibbs free energy of a solid system starting from a harmonic reference state. This approach enables the direct comparison between the free energy of different structures, circumventing the need to sample the transition paths between them. We showcase this thermodynamic integration scheme by computing the Gibbs free energy associated with a vacancy in BCC iron, and the intrinsic stacking fault free energy of nickel. These examples highlight the pitfalls of estimating the free energy of crystallographic defects only using the minimum potential energy, which overestimates the vacancy free energy by 60% and the stacking-fault energy by almost 300% at temperatures close to the melting point.
References in corpus (7)
- Canonical sampling through velocity-rescaling
- Determination of phase diagrams via computer simulation: Methodology and applications to water, electrolytes and proteins
- Nonequilibrium free-energy calculation of solids using LAMMPS
- Anharmonic and Quantum Fluctuations in Molecular Crystals: A First-Principles Study of the Stability of Paracetamol
- Stability of Complex Biomolecular Structures: Vander Waals, Hydrogen Bond Cooperativity, and Nuclear Quantum Effects
- Computing the free energy of molecular solids by the Einstein molecule approach: Ices XIII and XIV, hard-dumbbells and a patchy model of proteins
- Quasi-harmonic approximation of thermodynamic properties of ice Ih, II, and III
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