On the force--velocity relationship of a bundle of rigid living filaments
arXiv:1708.07027 · doi:10.1063/1.5001124
Abstract
In various cellular processes, biofilaments like F-actin and F-tubulin are able to exploit chemical energy associated to polymerization to perform mechanical work against an external load. The force-velocity relationship quantitatively summarizes the nature of this process. By a stochastic dynamical model, we give, together with the evolution of a staggered bundle of rigid living filaments facing a loaded wall, the corresponding force--velocity relationship. We compute systematically the simplified evolution of the model in supercritical conditions at , where is the monomer size, is the obstacle diffusion coefficient, and are the polymerization and depolymerization rates. Moreover, we see that the solution at is valid for a good range of small non-zero values. We consider two classical protocols: the bundle is opposed either to a constant load or to an optical trap set-up, characterized by a harmonic restoring force. The constant force case leads, for each value, to a stationary velocity after a relaxation with characteristic time . When the bundle (initially taken as an assembly of filament seeds) is subjected to a harmonic restoring force (optical trap load), the bundle elongates and the load increases up to stalling (equilibrium) over a characteristic time . Extracted from this single experiment, the force-velocity curve is found to coincide with , except at low loads. We show that this result follows from the adiabatic separation between and , i.e. .
19 pages, 5 figures