Hydrodynamics of Suspensions of Passive and Active Rigid Particles: A Rigid Multiblob Approach
arXiv:1602.02170 · doi:10.2140/camcos.2016.11.217
Abstract
We develop a rigid multiblob method for numerically solving the mobility problem for suspensions of passive and active rigid particles of complex shape in Stokes flow in unconfined, partially confined, and fully confined geometries. As in a number of existing methods, we discretize rigid bodies using a collection of minimally-resolved spherical blobs constrained to move as a rigid body, to arrive at a potentially large linear system of equations for the unknown Lagrange multipliers and rigid-body motions. Here we develop a block-diagonal preconditioner for this linear system and show that a standard Krylov solver converges in a modest number of iterations that is essentially independent of the number of particles. For unbounded suspensions and suspensions sedimented against a single no-slip boundary, we rely on existing analytical expressions for the Rotne-Prager tensor combined with a fast multipole method or a direct summation on a Graphical Processing Unit to obtain an simple yet efficient and scalable implementation. For fully confined domains, such as periodic suspensions or suspensions confined in slit and square channels, we extend a recently-developed rigid-body immersed boundary method to suspensions of freely-moving passive or active rigid particles at zero Reynolds number. We demonstrate that the iterative solver for the coupled fluid and rigid body equations converges in a bounded number of iterations regardless of the system size. We optimize a number of parameters in the iterative solvers and apply our method to a variety of benchmark problems to carefully assess the accuracy of the rigid multiblob approach as a function of the resolution. We also model the dynamics of colloidal particles studied in recent experiments, such as passive boomerangs in a slit channel, as well as a pair of non-Brownian active nanorods sedimented against a wall.
Under revision in CAMCOS, Nov 2016
References in corpus (10)
- Fluid transport at low Reynolds number with magnetically actuated artificial cilia
- A boundary element regularised Stokeslet method applied to cilia and flagella-driven flow
- A fast platform for simulating flexible fiber suspensions applied to cell mechanics
- A general formulation of Bead Models applied to flexible fibers and active filaments at low Reynolds number
- Dynamic Density Functional Theory with hydrodynamic interactions and fluctuations
- Universal hydrodynamic mechanisms for crystallization in active colloidal suspensions
- A regularised singularity approach to phoretic problems
- Many-body microhydrodynamics of colloidal particles with active boundary layers
- Short-time transport properties of bidisperse suspensions and porous media: a Stokesian Dynamics study
- A multiblob approach to colloidal hydrodynamics with inherent lubrication
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