Smoothing parameter and model selection for general smooth models
arXiv:1511.03864 · doi:10.1080/01621459.2016.1180986
Abstract
This paper discusses a general framework for smoothing parameter estimation for models with regular likelihoods constructed in terms of unknown smooth functions of covariates. Gaussian random effects and parametric terms may also be present. By construction the method is numerically stable and convergent, and enables smoothing parameter uncertainty to be quantified. The latter enables us to fix a well known problem with AIC for such models. The smooth functions are represented by reduced rank spline like smoothers, with associated quadratic penalties measuring function smoothness. Model estimation is by penalized likelihood maximization, where the smoothing parameters controlling the extent of penalization are estimated by Laplace approximate marginal likelihood. The methods cover, for example, generalized additive models for non-exponential family responses (for example beta, ordered categorical, scaled t distribution, negative binomial and Tweedie distributions), generalized additive models for location scale and shape (for example two stage zero inflation models, and Gaussian location-scale models), Cox proportional hazards models and multivariate additive models. The framework reduces the implementation of new model classes to the coding of some standard derivatives of the log likelihood.
References in corpus (1)
Cited by in corpus (32)
- Fast calibrated additive quantile regression
- Gratia: An R package for exploring generalized additive models
- A generalized Fellner-Schall method for smoothing parameter estimation with application to Tweedie location, scale and shape models
- Probabilistic Forecasting of Regional Net-load with Conditional Extremes and Gridded NWP
- On the Interplay of Regional Mobility, Social Connectedness, and the Spread of COVID-19 in Germany
- Inferring UK COVID-19 fatal infection trajectories from daily mortality data: were infections already in decline before the UK lockdowns?
- Distributional data analysis via quantile functions and its application to modelling digital biomarkers of gait in Alzheimer's Disease
- Human Interpretation of Saliency-based Explanation Over Text
- Bayesian views of generalized additive modelling
- On the estimation of variance parameters in non-standard generalised linear mixed models: Application to penalised smoothing
- A modeler's guide to extreme value software
- Fast, Scalable Approximations to Posterior Distributions in Extended Latent Gaussian Models
- Longitudinal modeling of age-dependent latent traits with generalized additive latent and mixed models
- Separable and Semiparametric Network-based Counting Processes applied to the International Combat Aircraft Trades
- Semiparametric Regression using Variational Approximations
- Adaptive Smoothing for Trajectory Reconstruction
- A General Framework for Multivariate Functional Principal Component Analysis of Amplitude and Phase Variation
- Generalized Kernel Regularized Least Squares
- covXtreme : MATLAB software for non-stationary penalised piecewise constant marginal and conditional extreme value models
- Inference for bivariate extremes via a semi-parametric angular-radial model
- Fallopian tube anatomy predicts pregnancy and pregnancy outcomes after tubal reversal surgery
- A flexible multivariate random effects proportional odds model with application to adverse effects during radiation therapy
- Variable importance measures for heterogeneous treatment effects
- Adding smoothing splines to the SAM model improves stock assessment
- P-splines with an l1 penalty for repeated measures
- Comparison of methods for analyzing environmental mixtures effects on survival outcomes and application to a population-based cohort study
- Data filtering methods for SARS-CoV-2 wastewater surveillance
- Nearest neighbor ratio imputation with incomplete multi-nomial outcome in survey sampling
- Non-stationary GEV models for estimating design sea-states in a changing climate. Applications to offshore wind farms along the French coasts
- Personalised dynamic super learning: an application in predicting hemodiafiltration convection volumes
- An utopic adventure in the modelling of conditional univariate and multivariate extremes
- No Silver Bullets: Why Understanding Software Cycle Time is Messy, Not Magic