Application of a Semi-automatic Algorithm for Identification of Molecular Components in SBML Models
arXiv:1309.7689 · doi:10.4204/EPTCS.130.7
Abstract
Reactions forming a pathway can be rewritten by making explicit the different molecular components involved in them. A molecular component represents a biological entity (e.g. a protein) in all its states (free, bound, degraded, etc.). In this paper we show the application of a component identification algorithm to a number of real-world models to experimentally validate the approach. Components identification allows subpathways to be computed to better understand the pathway functioning.
In Proceedings Wivace 2013, arXiv:1309.7122