New phase transition in random planar diagrams and RNA-type matching

Abstract

We study the planar matching problem, defined by a symmetric random matrix with independent identically distributed entries, taking values 0 and 1. We show that the existence of a perfect planar matching structure is possible only above a certain critical density, $p_c$, of allowed contacts (i.e. of '1'). Using a formulation of the problem in terms of Dyck paths and a matrix model of planar contact structures, we provide an analytical estimation for the value of the transition point, $p_c$, in the thermodynamic limit. This estimation is close to the critical value, $p_c\approx 0.379$, obtained in numerical simulations based on an exact dynamical programming algorithm. We characterize the corresponding critical behavior of the model and discuss the relation of the perfect-imperfect matching transition to the known molten-glass transition in the context of random RNA secondary structure's formation. In particular, we provide strong evidence supporting the conjecture that the molten-glass transition at T=0 occurs at $p_c$.

8 pages, 6 figures (we have added the new fig.4)

References in corpus (3)

• Ground state and glass transition of the RNA secondary structure
• Necklace-Cloverleaf Transition in Associating RNA-like Diblock Copolymers
• New alphabet-dependent morphological transition in a random RNA alignment

Cited by in corpus (1)

• Topological transition in disordered planar matching: combinatorial arcs expansion