Probabilistic Phase Space Trajectory Description for Anomalous Polymer Dynamics
arXiv:1007.0378 · doi:10.1088/0953-8984/23/10/105103
Abstract
It has been recently shown that the phase space trajectories for the anomalous dynamics of a tagged monomer of a polymer --- for single polymeric systems such as phantom Rouse, self-avoiding Rouse, Zimm, reptation, and translocation through a narrow pore in a membrane; as well as for many-polymeric system such as polymer melts in the entangled regime --- is robustly described by the Generalized Langevin Equation (GLE). Here I show that the probability distribution of phase space trajectories for all these classical anomalous dynamics for single polymers is that of a fractional Brownian motion (fBm), while the dynamics for polymer melts between the entangled regime and the eventual diffusive regime exhibits small, but systematic deviations from that of a fBm.
8 pages, two figures, 3 eps figure files, minor changes, supplementary material included moved to the appendix, references expanded, to appear in J. Phys.: Condens. Matter
References in corpus (19)
- Fractional Langevin equation
- Foundation of Fractional Langevin Equation: Harmonization of a Many Body Problem
- Polymer translocation through a nanopore - a showcase of anomalous diffusion
- Anomalous Dynamics of Unbiased Polymer Translocation through a Narrow Pore
- When translocation dynamics becomes anomalous
- Pore-blockade Times for Field-Driven Polymer Translocation
- Passage Times for Unbiased Polymer Translocation through a Narrow Pore
- Anomalous Polymer Dynamics Is Non-Markovian: Memory Effects and The Generalized Langevin Equation Formulation
- Generalized Langevin Equation Formulation for Anomalous Polymer Dynamics
- Asymptotic behavior of self-affine processes in semi-infinite domains
- Passage Times for Polymer Translocation Pulled through a Narrow Pore
- Polymer Translocation out of Planar Confinements
- First passage times and asymmetry of DNA translocation
- Probability distributions for polymer translocation
- Rouse Modes of Self-avoiding Flexible Polymers
- Non-Equilibrium Dynamics of Single polymer Adsorption to Solid Surfaces
- Reaching large lengths and long times in polymer dynamics simulations
- Dynamics of Selfavoiding Tethered Membranes I Model A Dynamics (Rouse Model)
- Amplitude and Frequency Spectrum of Thermal Fluctuations of A Translocating RNA Molecule
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- Dynamics of a tagged monomer: Effects of elastic pinning and harmonic absorption
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