Intrinsic limitations of inverse inference in the pairwise Ising spin glass
arXiv:0911.1985 · doi:10.1088/1742-5468/2010/02/P02008
Abstract
We analyze the limits inherent to the inverse reconstruction of a pairwise Ising spin glass based on susceptibility propagation. We establish the conditions under which the susceptibility propagation algorithm is able to reconstruct the characteristics of the network given first- and second-order local observables, evaluate eventual errors due to various types of noise in the originally observed data, and discuss the scaling of the problem with the number of degrees of freedom.
References in corpus (4)
- Identification of direct residue contacts in protein-protein interaction by message passing
- The Ising Model for Neural Data: Model Quality and Approximate Methods for Extracting Functional Connectivity
- Statistical physics of pairwise probability models
- Small-correlation expansions for the inverse Ising problem
Cited by in corpus (17)
- Improved contact prediction in proteins: Using pseudolikelihoods to infer Potts models
- Inverse statistical problems: from the inverse Ising problem to data science
- Inverse Ising inference using all the data
- Adaptive Cluster Expansion for Inferring Boltzmann Machines with Noisy Data
- Adaptive cluster expansion for the inverse Ising problem: convergence, algorithm and tests
- The Bethe approximation for solving the inverse Ising problem: a comparison with other inference methods
- High-Dimensional Inference with the generalized Hopfield Model: Principal Component Analysis and Corrections
- Network inference using asynchronously updated kinetic Ising Model
- Susceptibility Propagation by Using Diagonal Consistency
- Inference and learning in sparse systems with multiple states
- Dynamics and Performance of Susceptibility Propagation on Synthetic Data
- Inverse Ising problem for one-dimensional chains with arbitrary finite-range couplings
- Counting solutions from finite samplings
- Beyond inverse Ising model: structure of the analytical solution for a class of inverse problems
- Message passing algorithms for the Hopfield network reconstruction: threshold behavior and limitation
- State sampling dependence of the Hopfield network inference
- Solving Non-parametric Inverse Problem in Continuous Markov Random Field using Loopy Belief Propagation