On the number of allelic types for samples taken from exchangeable coalescents with mutation

Abstract

Let $K_n$ denote the number of types of a sample of size $n$ taken from an exchangeable coalescent process ($\Xi$-coalescent) with mutation. A distributional recursion for the sequence $(K_n{)}_{n\in \mathbb{N}}$ is derived. If the coalescent does not have proper frequencies, i.e., if the characterizing measure $\Xi$ on the infinite simplex $\Delta$ does not have mass at zero and satisfies ${\int }_{\Delta }|x|\Xi (dx)/(x,x)<\infty$, where $|x|:={\sum }_{i=1}^{\infty }{x}_i$ and $(x,x):={\sum }_{i=1}^{\infty }{x}_i^2$ for $x=(x_1,x_2,...)\in \Delta$, then $K_n/n$ converges weakly as $n\to \infty$ to a limiting variable $K$ which is characterized by an exponential integral of the subordinator associated with the coalescent process. For so-called simple measures $\Xi$ satisfying ${\int }_{\Delta }\Xi (dx)/(x,x)<\infty$ we characterize the distribution of $K$ via a fixed-point equation.

21 pages