output
20082022
most citedTopological Methods for Exploring Low-density States in Biomolecular Folding Pathways

143 citations

6 papers

cs.LO2022★ 1 cited

Formalising Geometric Axioms for Minkowski Spacetime and Without-Loss-of-Generality Theorems

Richard Schmoetten, Jake Palmer, Jacques Fleuriot

This contribution reports on the continued formalisation of an axiomatic system for Minkowski spacetime (as used in the study of Special Relativity) which is closer in spirit to Hi…

cs.CV2014★ 13 cited

A fast patch-dictionary method for whole image recovery

Yangyang Xu, Wotao Yin

Various algorithms have been proposed for dictionary learning. Among those for image processing, many use image patches to form dictionaries. This paper focuses on whole-image reco…

math.CO2014

Coxeter-Knuth graphs and a signed Little map for type B reduced words

Sara Billey, Zachary Hamaker, Austin Roberts +1

We define an analog of David Little's algorithm for reduced words in type B, and investigate its main properties. In particular, we show that our algorithm preserves the recording…

cs.IT2013★ 2 cited

On the mixed -divergence for multiple pairs of measures

Elisabeth M. Werner, Deping Ye

In this paper, the concept of the classical -divergence (for a pair of measures) is extended to the mixed -divergence (for multiple pairs of measures). The mixed -divergen…

math.CO2013

On the maximum induced density of directed stars and related problems

Hao Huang

Let k>=3 be an integer, we prove that the maximum induced density of the k-vertex directed star in a directed graph is attained by an iterated blow-up construction. This confirms a…

q-bio.BM2008★ 143 cited

Topological Methods for Exploring Low-density States in Biomolecular Folding Pathways

Yuan Yao, Jian Sun, Xuhui Huang +3

Characterization of transient intermediate or transition states is crucial for the description of biomolecular folding pathways, which is however difficult in both experiments and…