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20062026
most citedPLUMED 2: New feathers for an old bird

3.9k citations

Showing 2013Show all

9 papers · 1 filter

cond-mat.mes-hall2013★ 33 cited

Optically Detected Cross-Relaxation Spectroscopy of Electron Spins in Diamond

Hai-Jing Wang, Chang S. Shin, Scott J. Seltzer +3

The application of magnetic resonance (MR) spectroscopy at progressively smaller length scales may eventually permit "chemical imaging" of spins at the surfaces of materials and bi…

q-bio.BM2013

Activation-triggered subunit exchange between CaMKII holoenzymes facilitates the spread of kinase activity

Margaret M. Stratton, Il-Hyung Lee, Moitrayee Bhattacharyya +5

The activation of the dodecameric Ca2+/calmodulin dependent kinase II (CaMKII) holoenzyme is critical for the formation of memory. We now report that CaMKII has a remarkable proper…

physics.comp-ph2013★ 3.9k cited

PLUMED 2: New feathers for an old bird

Gareth A. Tribello, Massimiliano Bonomi, Davide Branduardi +2

Enhancing sampling and analyzing simulations are central issues in molecular simulation. Recently, we introduced PLUMED, an open-source plug-in that provides some of the most popul…

quant-ph2013★ 34 cited

Suppression of electron spin decoherence of the diamond NV center by a transverse magnetic field

Chang S. Shin, Claudia E. Avalos, Mark C. Butler +5

We demonstrate that the spin decoherence of nitrogen vacancy (NV) centers in diamond can be suppressed by a transverse magnetic field if the electron spin bath is the primary decoh…

q-bio.PE2013★ 38 cited

Robust forward simulations of recurrent hitchhiking

Lawrence H. Uricchio, Ryan D. Hernandez

Evolutionary forces shape patterns of genetic diversity within populations and contribute to phenotypic variation. In particular, recurrent positive selection has attracted signifi…

q-bio.PE2013

The rate of adaptation in large sexual populations with linear chromosomes

D. B. Weissman, O. Hallatschek

In large populations, multiple beneficial mutations may be simultaneously spreading. In asexual populations, these mutations must either arise on the same background or compete aga…