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8 papers · 1 filter
Anomalous scaling in nanopore translocation of structured heteropolymers
Malcolm McCauley, Robert Forties, Ulrich Gerland +1
Translocation through a nanopore is a new experimental technique to probe physical properties of biomolecules. A bulk of theoretical and computational work exists on the dependence…
Microtubule dynamics depart from wormlike chain model
Katja M. Taute, Francesco Pampaloni, Erwin Frey +1
Thermal shape fluctuations of grafted microtubules were studied using high resolution particle tracking of attached fluorescent beads. First mode relaxation times were extracted fr…
Fluctuating semiflexible polymer ribbon constrained to a ring
Karen Alim, Erwin Frey
Twist stiffness and an asymmetric bending stiffness of a polymer or a polymer bundle is captured by the elastic ribbon model. We investigate the effects a ring geometry induces to…
A Finite Element framework for computation of protein normal modes and mechanical response
Mark Bathe
A coarse-grained computational procedure based on the Finite Element Method is proposed to calculate the normal modes and mechanical response of proteins and their supramolecular a…
Shapes of Semiflexible Polymer Rings
Karen Alim, Erwin Frey
The shape of semiflexible polymer rings is studied over their whole range of flexibility. Investigating the joint distribution of asphericity and nature of asphericity as well as t…
An intermediate phase in DNA melting
Richard A. Neher, Ulrich Gerland
We predict a novel temperature-driven phase transition of DNA below the melting transition. The additional, intermediate phase exists for repetitive sequences, when the two strands…