output
20162021
most citedConvolutional Neural Networks for Classification of Alzheimer's Disease: Overview and Reproducible Evaluation

821 citations

17 papers

q-bio.NC2021★ 2 cited

Multiscale modeling of brain network organization

Charley Presigny, Fabrizio De Vico Fallani

A complete understanding of the brain requires an integrated description of the numerous scales of neural organization. It means studying the interplay of genes, synapses, and even…

stat.ML2021★ 103 cited

Data Augmentation in High Dimensional Low Sample Size Setting Using a Geometry-Based Variational Autoencoder

Clément Chadebec, Elina Thibeau-Sutre, Ninon Burgos +1

In this paper, we propose a new method to perform data augmentation in a reliable way in the High Dimensional Low Sample Size (HDLSS) setting using a geometry-based variational aut…

q-bio.NC2020★ 2 cited

Improving J-divergence of brain connectivity states by graph Laplacian denoising

Tiziana Cattai, Gaetano Scarano, Marie-Constance Corsi +3

Functional connectivity (FC) can be represented as a network, and is frequently used to better understand the neural underpinnings of complex tasks such as motor imagery (MI) detec…

stat.ML2020★ 6 cited

Geometry-Aware Hamiltonian Variational Auto-Encoder

Clément Chadebec, Clément Mantoux, Stéphanie Allassonnière

Variational auto-encoders (VAEs) have proven to be a well suited tool for performing dimensionality reduction by extracting latent variables lying in a potentially much smaller dim…

q-bio.NC2020

BCI learning induces core-periphery reorganization in M/EEG multiplex brain networks

Marie-Constance Corsi, Mario Chavez, Denis Schwartz +6

Brain-computer interfaces (BCIs) constitute a promising tool for communication and control. However, mastering non-invasive closed-loop systems remains a learned skill that is diff…

q-bio.PE2020★ 7 cited

Inferring epistasis from genomic data with comparable mutation and outcrossing rate

Hong-Li Zeng, Eugenio Mauri, Vito Dichio +3

We consider a population evolving due to mutation, selection and recombination, where selection includes single-locus terms (additive fitness) and two-loci terms (pairwise epistati…

cs.LG2020

Gaussian Graphical Model exploration and selection in high dimension low sample size setting

Thomas Lartigue, Simona Bottani, Stephanie Baron +3

Gaussian Graphical Models (GGM) are often used to describe the conditional correlations between the components of a random vector. In this article, we compare two families of GGM i…

q-bio.NC2019★ 8 cited

Temporal connection signatures of human brain networks after stroke

Catalina Obando, Charlotte Rosso, Joshua Siegel +2

Plasticity after stroke is a complex phenomenon initiated by the functional reorganization of the brain, especially in the perilesional tissue. At macroscales, the reestablishment…

cs.LG2019★ 821 cited

Convolutional Neural Networks for Classification of Alzheimer's Disease: Overview and Reproducible Evaluation

Junhao Wen, Elina Thibeau-Sutre, Mauricio Diaz-Melo +7

Over 30 papers have proposed to use convolutional neural network (CNN) for AD classification from anatomical MRI. However, the classification performance is difficult to compare ac…

cs.LG2018★ 181 cited

Reproducible evaluation of classification methods in Alzheimer's disease: framework and application to MRI and PET data

Jorge Samper-González, Ninon Burgos, Simona Bottani +13

A large number of papers have introduced novel machine learning and feature extraction methods for automatic classification of AD. However, they are difficult to reproduce because…

q-bio.QM2018

Converting Alzheimer s disease map into a heavyweight ontology: a formal network to integrate data

Vincent Henry, Ivan Moszer, Olivier Dameron +3

Alzheimer s disease (AD) pathophysiology is still imperfectly understood and current paradigms have not led to curative outcome. Omics technologies offer great promises for improvi…

q-bio.NC2018★ 44 cited

Network neuroscience for optimizing brain-computer interfaces

Fabrizio De Vico Fallani, Danielle S. Bassett

Human-machine interactions are being increasingly explored to create alternative ways of communication and to improve our daily life. Based on a classification of the user's intent…

q-bio.NC2017★ 3 cited

Integrating EEG and MEG signals to improve motor imagery classification in brain-computer interfaces

Marie-Constance Corsi, Mario Chavez, Denis Schwartz +4

We propose a fusion approach that combines features from simultaneously recorded electroencephalographic (EEG) and magnetoencephalographic (MEG) signals to improve classification p…

q-bio.NC2017★ 111 cited

Loss of brain inter-frequency hubs in Alzheimer's disease

Jeremy Guillon, Yohan Attal, Olivier Colliot +5

Alzheimer's disease (AD) causes alterations of brain network structure and function. The latter consists of connectivity changes between oscillatory processes at different frequenc…

cs.CV2016

Robust imaging of hippocampal inner structure at 7T: in vivo acquisition protocol and methodological choices

Linda Marrakchi-Kacem, Alexandre Vignaud, Julien Sein +8

OBJECTIVE:Motion-robust multi-slab imaging of hippocampal inner structure in vivo at 7T.MATERIALS AND METHODS:Motion is a crucial issue for ultra-high resolution imaging, such as c…

q-bio.NC2016★ 124 cited

A topological criterion for filtering information in complex brain networks

Fabrizio De Vico Fallani, Vito Latora, Mario Chavez

In many biological systems, the network of interactions between the elements can only be inferred from experimental measurements. In neuroscience, non-invasive imaging tools are ex…

cs.HC2016★ 41 cited

Riemannian geometry applied to detection of respiratory states from EEG signals: the basis for a brain-ventilator interface

X Navarro-Sune, A. L. Hudson, F. De Vico Fallani +6

During mechanical ventilation, patient-ventilator disharmony is frequently observed and may result in increased breathing effort, compromising the patient's comfort and recovery. T…