output
20172024
most citedNellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

34 citations

6 papers

cs.CV2024★ 34 cited

Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

Austin E. Y. T. Lefebvre, Gabriel Sturm, Ting-Yu Lin +4

The analysis of dynamic organelles remains a formidable challenge, though key to understanding biological processes. We introduce Nellie, an automated and unbiased user-friendly pi…

eess.IV2021★ 11 cited

Swap-Free Fat-Water Separation in Dixon MRI using Conditional Generative Adversarial Networks

Nicolas Basty, Marjola Thanaj, Madeleine Cule +5

Dixon MRI is widely used for body composition studies. Current processing methods associated with large whole-body volumes are time intensive and prone to artifacts during fat-wate…

eess.IV2020★ 33 cited

Large-Scale Analysis of Iliopsoas Muscle Volumes in the UK Biobank

Julie Fitzpatrick, Nicolas Basty, Madeleine Cule +4

Psoas muscle measurements are frequently used as markers of sarcopenia and predictors of health. Manually measured cross-sectional areas are most commonly used, but there is a lack…

cs.CV2018★ 18 cited

A Pixel-Based Framework for Data-Driven Clothing

Ning Jin, Yilin Zhu, Zhenglin Geng +1

With the aim of creating virtual cloth deformations more similar to real world clothing, we propose a new computational framework that recasts three dimensional cloth deformation a…

cs.LG2018★ 9 cited

Inferring Multidimensional Rates of Aging from Cross-Sectional Data

Emma Pierson, Pang Wei Koh, Tatsunori Hashimoto +4

Modeling how individuals evolve over time is a fundamental problem in the natural and social sciences. However, existing datasets are often cross-sectional with each individual obs…

cond-mat.stat-mech2017★ 16 cited

Anomalous Dimension in a Two-Species Reaction-Diffusion System

Benjamin Vollmayr-Lee, Jack Hanson, R. Scott McIsaac +1

We study a two-species reaction-diffusion system with the reactions and , with general diffusion constants and . Previous studies showed that f…