output
20112024
most citedCodabench: Flexible, Easy-to-Use and Reproducible Benchmarking Platform

98 citations

13 papers

physics.ao-ph2024★ 18 cited

Influence of climate variability on the potential forage production of a mown permanent grassland in the French Massif Central

Iñigo Gómara, Gianni Bellocchi, Raphaël Martin +2

Climate Services (CS) provide support to decision makers across socio-economic sectors. In the agricultural sector, one of the most important CS applications is to provide timely a…

q-bio.TO2023★ 3 cited

In vivo impact on rabbit subchondral bone of viscosupplementation with a hyaluronic acid antioxidant conjugate

Romain Rieger, Sema Kaderli, Caroline Boulocher

This study aimed to assess the effects of an antioxidant-conjugated Hyaluronic Acid (HA), specifically HA-4-aminoresorcinol (HA4AR), on articular cartilage and subchondral bone in…

physics.bio-ph2023★ 14 cited

Emergence of homochirality via template-directed ligation in an RNA reactor

Gabin Laurent, Tobias Göppel, David Lacoste +1

RNA in extant biological systems is homochiral; it consists exclusively of D-ribonucleotides rather than L-ribonucleotides. How the homochirality of RNA emerged is not known. Here,…

q-bio.TO2023★ 4 cited

Numerical modeling of hydrogel scaffold anisotropy during extrusion-based 3D printing for tissue engineering

V. T. Mai, R. Chatelin, E. -J. Courtial +2

Extrusion-based 3D printing is a widely utilized tool in tissue engineering, offering precise 3D control of bioinks to construct organ-sized biomaterial objects with hierarchically…

physics.med-ph2023★ 11 cited

Definition and evaluation of a finite element model of the human heel for diabetic foot ulcer prevention under shearing loads

Alessio Trebbi, Nolwenn Fougeron, Yohan Payan

Diabetic foot ulcers are triggered by mechanical loadings applied to the surface of the plantar skin. Strain is considered to play a crucial role in relation to ulcer etiology and…

q-bio.BM2023★ 40 cited

DNA supercoiling in bacteria: state of play and challenges from a viewpoint of physics based modeling

Ivan Junier, Elham Ghobadpour, Olivier Espeli +1

DNA supercoiling is central to many fundamental processes of living organisms. Its average level along the chromosome and over time reflects the dynamic equilibrium of opposite act…

physics.med-ph2023

Pressure Ulcers and Dressings: A Strain Sensitivity Analysis of the Boundary Conditions of a Finite Element Model

Nolwenn Fougeron, Isabelle Rivals, Nathanaël Connesson +6

Recently, a new bi-layer dressing was proposed by Urgo RID to reduce the healing time of pressure ulcers (PU). This dressing was numerically evaluated in previously published work.…

q-bio.QM2021★ 38 cited

FAIR Data Pipeline: provenance-driven data management for traceable scientific workflows

Sonia Natalie Mitchell, Andrew Lahiff, Nathan Cummings +35

Modern epidemiological analyses to understand and combat the spread of disease depend critically on access to, and use of, data. Rapidly evolving data, such as data streams changin…

cs.LG2021★ 98 cited

Codabench: Flexible, Easy-to-Use and Reproducible Benchmarking Platform

Zhen Xu, Sergio Escalera, Isabelle Guyon +5

Obtaining standardized crowdsourced benchmark of computational methods is a major issue in data science communities. Dedicated frameworks enabling fair benchmarking in a unified en…

eess.IV2021★ 45 cited

Exploring convolutional neural networks with transfer learning for diagnosing Lyme disease from skin lesion images

Sk Imran Hossain, Jocelyn de Goër de Herve, Md Shahriar Hassan +16

Lyme disease which is one of the most common infectious vector-borne diseases manifests itself in most cases with erythema migrans (EM) skin lesions. Recent studies show that convo…

physics.med-ph2018★ 43 cited

A biomechanical breast model evaluated with respect to MRI data collected in three different positions

Anna Mîra, Ann-Katherine Carton, Serge Muller +1

Background: Mammography is a specific type of breast imaging that uses low-dose X-rays to detect cancer in early stage. During the exam, the women breast is compressed between two…

cond-mat.soft2011★ 6 cited

Rupture of a Biomembrane under Dynamic Surface Tension

D. J. Bicout, E. I. Kats

How long a fluid membrane vesicle stressed with a steady ramp of micropipette last before rupture? Or conversely, how high the surface tension should be to rupture a membrane? To a…

physics.atom-ph2011★ 5 cited

Size-independence of statistics for boundary collisions of random walks and its implications for spin-polarized gases

Dominique J. Bicout, Efim Kats, Alexander K. Petukhov +1

A bounded random walk exhibits strong correlations between collisions with a boundary. For an one-dimensional walk, we obtain the full statistical distribution of the number of suc…