153 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- University of ManchesterGB5 papers
- Idiap Research InstituteCH4 papers
- Centre National de la Recherche ScientifiqueFR2 papers
- National Physical LaboratoryGB2 papers
- Université de BordeauxFR2 papers
- University of OxfordGB2 papers
- Åbo Akademi UniversityFI1 paper
- Agency for Science, Technology and ResearchSG1 paper
- Alberta Medical AssociationCA1 paper
- Allen Institute for Cell ScienceUS1 paper
- BioCampus MontpellierFR1 paper
- Bordeaux Imaging CenterFR1 paper
7 papers
Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation
Magdalena Wysocka, Oskar Wysocki, Maxime Delmas +2
The paper introduces a framework for the evaluation of the encoding of factual scientific knowledge, designed to streamline the manual evaluation process typically conducted by dom…
Assessing the communication gap between AI models and healthcare professionals: explainability, utility and trust in AI-driven clinical decision-making
Oskar Wysocki, Jessica Katharine Davies, Markel Vigo +4
This paper contributes with a pragmatic evaluation framework for explainable Machine Learning (ML) models for clinical decision support. The study revealed a more nuanced role for…
Transformers and the representation of biomedical background knowledge
Oskar Wysocki, Zili Zhou, Paul O'Regan +4
Specialised transformers-based models (such as BioBERT and BioMegatron) are adapted for the biomedical domain based on publicly available biomedical corpora. As such, they have the…
A Graph Based Neural Network Approach to Immune Profiling of Multiplexed Tissue Samples
Natalia Garcia Martin, Stefano Malacrino, Marta Wojciechowska +8
Multiplexed immunofluorescence provides an unprecedented opportunity for studying specific cell-to-cell and cell microenvironment interactions. We employ graph neural networks to c…
A new Standard DNA damage (SDD) data format
J. Schuemann, A. McNamara, J. W. Warmenhoven +48
Our understanding of radiation induced cellular damage has greatly improved over the past decades. Despite this progress, there are still many obstacles to fully understanding how…
QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy
Glyn Nelson, Ulrike Boehm, Steve Bagley +97
In April 2020, the QUality Assessment and REProducibility for Instruments and Images in Light Microscopy (QUAREP-LiMi) initiative was formed. This initiative comprises imaging scie…
What is SemEval evaluating? A Systematic Analysis of Evaluation Campaigns in NLP
Oskar Wysocki, Malina Florea, Andre Freitas
SemEval is the primary venue in the NLP community for the proposal of new challenges and for the systematic empirical evaluation of NLP systems. This paper provides a systematic qu…