output
20212024
most citedIdentification of Rare Cortical Folding Patterns using Unsupervised Deep Learning

9 citations

9 papers

q-bio.NC2024★ 1 cited

Self-supervised contrastive learning unveils cortical folding pattern linked to prematurity

Julien Laval, Aymeric Gaudin, Vincent Frouin +5

Brain folding patterns have been reported to carry clinically relevant information. The brain folds mainly during the last trimester of pregnancy, and the process might be durably…

eess.SP2024

SNAKE-fMRI: A modular fMRI data simulator from the space-time domain to k-space and back

Pierre-Antoine Comby, Alexandre Vignaud, Philippe Ciuciu

We propose a new, modular, open-source, Python-based 3D+time fMRI data simulation software, \emph{SNAKE-fMRI}, which stands for \emph{S}imulator from \emph{N}eurovascular coupling…

cs.CV2024

Separating common from salient patterns with Contrastive Representation Learning

Robin Louiset, Edouard Duchesnay, Antoine Grigis +1

Contrastive Analysis is a sub-field of Representation Learning that aims at separating common factors of variation between two datasets, a background (i.e., healthy subjects) and a…

cs.CV2023

SepVAE: a contrastive VAE to separate pathological patterns from healthy ones

Robin Louiset, Edouard Duchesnay, Antoine Grigis +2

Contrastive Analysis VAE (CA-VAEs) is a family of Variational auto-encoders (VAEs) that aims at separating the common factors of variation between a background dataset (BG) (i.e.,…

eess.IV2023

GeoLab: Geometry-based Tractography Parcellation of Superficial White Matter

Nabil Vindas, Nicole Labra Avila, Fan Zhang +3

Superficial white matter (SWM) has been less studied than long-range connections despite being of interest to clinical research, andfew tractography parcellation methods have been…

eess.IV2022★ 9 cited

Identification of Rare Cortical Folding Patterns using Unsupervised Deep Learning

Louise Guillon, Joël Chavas, Audrey Bénézit +3

Like fingerprints, cortical folding patterns are unique to each brain even though they follow a general species-specific organization. Some folding patterns have been linked with n…

cs.LG2022★ 4 cited

Unbiased Supervised Contrastive Learning

Carlo Alberto Barbano, Benoit Dufumier, Enzo Tartaglione +2

Many datasets are biased, namely they contain easy-to-learn features that are highly correlated with the target class only in the dataset but not in the true underlying distributio…

eess.IV2022

Generation of Synthetic Rat Brain MRI scans with a 3D Enhanced Alpha-GAN

André Ferreira, Ricardo Magalhães, Sébastien Mériaux +1

Translational brain research using Magnetic Resonance Imaging (MRI) is becoming increasingly popular as animal models are an essential part of scientific studies and more ultra-hig…

cs.DC2021★ 4 cited

Optimizing full 3D SPARKLING trajectories for high-resolution T2*-weighted Magnetic Resonance Imaging

Chaithya G R, Pierre Weiss, Guillaume Daval-Frérot +3

The Spreading Projection Algorithm for Rapid K-space samplING, or SPARKLING, is an optimization-driven method that has been recently introduced for accelerated 2D T2*-w MRI using c…