output
20002026
most citedInformation theory explanation of the fluctuation theorem, maximum entropy production and self-organized criticality in non-equilibrium stationary states

479 citations

researchers with a paper here

Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.

collaborating institutions
Showing 2013Show all

14 papers · 1 filter

stat.ML2013

Parametric Modelling of Multivariate Count Data Using Probabilistic Graphical Models

Pierre Fernique, Jean-Baptiste Durand, Yann Guédon

Multivariate count data are defined as the number of items of different categories issued from sampling within a population, which individuals are grouped into categories. The anal…

math.PR2013★ 1 cited

Quantitative results for the Fleming-Viot Particle system and quasi-stationary distributions in discrete space

Bertrand Cloez, Marie-Noémie Thai

We show, for a class of discrete Fleming-Viot (or Moran) type particle systems, that the convergence to the equilibrium is exponential for a suitable Wassertein coupling distance.…

physics.ao-ph2013★ 30 cited

Impact of storm risk on Faustmann rotation

Patrice Loisel

Global warming may induce in Western Europe an increase in storms. Hence the forest managers will have to take into account the risk increase. We study the impact of storm risk at…

q-bio.QM2013★ 59 cited

ProbMetab: an R package for Bayesian probabilistic annotation of LC-MS based metabolomics

Ricardo R. Silva, Fabien Jourdan, Diego M. Salvanha +5

We present ProbMetab, an R package which promotes substantial improvement in automatic probabilistic LC-MS based metabolome annotation. The inference engine core is based on a Baye…

q-bio.QM2013★ 28 cited

A biomarker based on gene expression indicates plant water status in controlled and natural environments

Gwenaëlle Marchand, Baptiste Mayjonade, Didier Varès +9

Plant or soil water status are required in many scientific fields to understand plant responses to drought. Because the transcriptomic response to abiotic conditions, such as water…

math.NA2013

Efficiency of the Wang-Landau algorithm: a simple test case

G. Fort, B. Jourdain, E. Kuhn +2

We analyze the efficiency of the Wang-Landau algorithm to sample a multimodal distribution on a prototypical simple test case. We show that the exit time from a metastable state is…

q-bio.MN2013

Bridging physiological and evolutionary time scales in a gene regulatory network

Gwenaëlle Marchand, Vân Anh Huynh-Thu, Nolan Kane +9

Gene regulatory networks (GRN) govern phenotypic adaptations and reflect the trade-offs between physiological responses and evolutionary adaptation that act at different time scale…

q-bio.MN2013

Structural thermokinetic modelling

Wolfram Liebermeister

Translating metabolic networks into dynamic models is difficult if kinetic constants are unknown. Structural Kinetic Modelling (SKM) replaces reaction elasticities by independent r…

q-bio.PE2013★ 26 cited

Timing of Pathogen Adaptation to a Multicomponent Treatment

Romain Bourget, Loïc Chaumont, Natalia Sapoukhina

The sustainable use of multicomponent treatments such as combination therapies, combination vaccines/chemicals, and plants carrying multigenic resistance requires an understanding…

math.PR2013★ 1 cited

A mass-structured individual-based model of the chemostat: convergence and simulation

Fabien Campillo, Coralie Fritsch

We propose a model of chemostat where the bacterial population is individually-based, each bacterium is explicitly represented and has a mass evolving continuously over time. The s…

math.ST2013★ 4 cited

Estimation of the parameters of a stochastic logistic growth model

Fabien Campillo, Marc Joannides, Irène Larramendy-Valverde

We consider a stochastic logistic growth model involving both birth and death rates in the drift and diffusion coefficients for which extinction eventually occurs almost surely. Th…

q-bio.PE2013★ 12 cited

Predicting coexistence of plants subject to a tolerance-competition trade-off

Bart Haegeman, Tewfik Sari, Rampal S. Etienne

Ecological trade-offs between species are often invoked to explain species coexistence in ecological communities. However, few mathematical models have been proposed for which coex…

q-bio.PE2013★ 25 cited

Impact of dispersal on the stability of metapopulations

Eric Tromeur, Lars Rudolf, Thilo Gross

Dispersal is a key ecological process, that enables local populations to form spatially extended systems called metapopulations. In the present study, we investigate how dispersal…

q-bio.PE2013★ 463 cited

Robust estimation of microbial diversity in theory and in practice

Bart Haegeman, Jérôme Hamelin, John Moriarty +3

Quantifying diversity is of central importance for the study of structure, function and evolution of microbial communities. The estimation of microbial diversity has received renew…