output
20162025
most citedWhole genome resequencing reveals diagnostic markers for investigating global migration and hybridization between minke whale species

21 citations

7 papers

stat.AP2025★ 3 cited

Adding smoothing splines to the SAM model improves stock assessment

Silius M. Vandeskog, Magne Aldrin, Daniel Howell +1

The stock assessment model SAM contains a large number of age-dependent parameters that must be manually grouped together to obtain robust inference. This can make the model select…

stat.CO2022★ 9 cited

A gentle tutorial on accelerated parameter and confidence interval estimation for hidden Markov models using Template Model Builder

Timothée Bacri, Geir D. Berentsen, Jan Bulla +1

A very common way to estimate the parameters of a hidden Markov model (HMM) is the relatively straightforward computation of maximum likelihood (ML) estimates. For this task, most…

eess.SP2021★ 6 cited

Quantitative processing of broadband data as implemented in a scientific splitbeam echosounder

Lars Nonboe Andersen, Dezhang Chu, Harald Heimvoll +3

The use of quantitative broadband echosounders for biological studies and surveys offers considerable advantages over narrowband echosounders. These include improved spectral-based…

cs.CV2019★ 3 cited

Biometric Fish Classification of Temperate Species Using Convolutional Neural Network with Squeeze-and-Excitation

Erlend Olsvik, Christian M. D. Trinh, Kristian Muri Knausgård +5

Our understanding and ability to effectively monitor and manage coastal ecosystems are severely limited by observation methods. Automatic recognition of species in natural environm…

q-bio.GN2019★ 3 cited

Using sequencing coverage statistics to identify sex chromosomes in minke whales

Ketil Malde, Rasmus Skern, Kevin A. Glover

The ever-increasing number of genome sequencing and resequencing projects is a central source of insights into the ecology and evolution of non-model organisms. An important aspect…

q-bio.GN2018★ 21 cited

Whole genome resequencing reveals diagnostic markers for investigating global migration and hybridization between minke whale species

Ketil Malde, Bjørghild B. Seliussen, María Quintela +11

Background: In the marine environment, where there are few absolute physical barriers, contemporary contact between previously isolated species can occur across great distances, an…

cs.DC2016★ 14 cited

META-pipe - Pipeline Annotation, Analysis and Visualization of Marine Metagenomic Sequence Data

Espen Mikal Robertsen, Tim Kahlke, Inge Alexander Raknes +5

The marine environment is one of the most important sources for microbial biodiversity on the planet. These microbes are drivers for many biogeochemical processes, and their enormo…